Bioinformatician

Position Highlights:

• Position: Bioinformatician
• Location: Evanston, IL
• Full Time
• Hours: Monday-Friday, [hours and flexible work schedules]

Job Description Summary:

Are you passionate about translating molecular advances into improvements in patient care through Personalized Medicine? The Center for Personalized Medicine at NorthShore University HealthSystem is looking for a PhD bioinformatician to join the bioinformatics team that built Flype (Am J Med Genet C Semin Med Genet. 2021 Mar;187(1):37-47. PMID: 33270363), our software that drives the interpretation and integration of NGS and pharmacogenomic assays to help guide patient care.

We are looking for a recent PhD graduate in bioinformatics, computational biology, molecular biology, or biochemistry with experience in Next Generation Sequencing particularly with the Illumina platform, working in the AWS cloud environment, and a deep knowledge of variant classification and interpretation.

A solid understanding of software development using Python, SQL & APIs as well as experience working in a Linux environment is a plus

Familiarity with Django web development as well as familiarity with NCBI & Ensembl databases, cancer-specific databases, and population-specific databases is a plus.

In addition to technical expertise, we are looking for an individual with a willingness to work in a team environment, leading some projects and contributing to others, as we continue to expand personalized medicine at our institution. The candidate will be encouraged to pursue independent research projects, but the position is primarily designed to contribute to the continued development and enhancement of Flype.

A Brief Overview:
The Bioinformatician position is critical for genomic translational research at NorthShore. This position is responsible for developing the following areas;
(a) Pipelines for Next Generation Sequencing data analysis & interpretation,
(b) Statistical methods for analyzing genetic data, and
(c) Supporting Molecular Pathology laboratory

What you will do:

• Contributes to the development and launch of software packages and algorithms for genomics analysis.
• Follows SOPs to enter 3rd party lab data into repository.
• Regularly reviews availability of publicly available annotation databases; keeps local copies of data up to date.
• Runs specimen data through analysis pipelines for special cases (like batch processing and legacy data).
• Performs related duties as assigned; trains users on how to use our software; gathers input from users to influence the roadmap.
• Maintains analysis pipelines and a web-based interface for clinicians and researchers and patients to view the data.
• Interacts with biologists, informaticians and the Epic team.

What you will need:

• Doctorate Computer and Information Science Required Or
• Doctorate Biology Required Or
• PHD Computer and Information Science Required Or
• PHD Biology Required
• 2 Years Experience in DNA bioinformatics analysis
• Ability to develop pipelines for analyzing NGS data
• Ability to develop statistical methods for analyzing genetic data
• Ability to develop methods for polygenic risk score
• Ability to review literature on bioinformatics and statistical genetics
• Ability to author peer-reviewed papers
• Ability to assist other investigators on grant applications.

Benefits:

• Career Pathways to Promote Professional Growth and Development
• Various Medical, Dental, and Vision options
• Tuition Reimbursement
• Free Parking at designated locations
• Wellness Program Savings Plan
• Health Savings Account Options
• Retirement Options with Company Match
• Paid Time Off
• Community Involvement Opportunities

Endeavor Health is a fully integrated healthcare delivery system committed to providing access to quality, vibrant, community-connected care, serving an area of more than 4.2 million residents across six northeast Illinois counties. Our more than 25,000 team members and more than 6,000 physicians aim to deliver transformative patient experiences and expert care close to home across more than 300 ambulatory locations and eight acute care hospitals - Edward (Naperville), Elmhurst, Evanston, Glenbrook (Glenview), Highland Park, Northwest Community (Arlington Heights) Skokie and Swedish (Chicago) - all recognized as Magnet hospitals for nursing excellence. For more information, visit www.endeavorhealth.org.

When you work for Endeavor Health, you will be part of an organization that encourages its employees to achieve career goals and maximize their professional potential.

Please explore our website (www.endeavorhealth.org) to better understand how Endeavor Health delivers on its mission to "help everyone in our communities be their best".

Endeavor Health is committed to working with and providing reasonable accommodation to individuals with disabilities. Please refer to the main career page for more information.

Diversity, equity and inclusion is at the core of who we are; being there for our patients and each other with compassion, respect and empathy. We believe that our strength resides in our differences and in connecting our best to provide community-connected healthcare for all.

EOE: Race/Color/Sex/Sexual Orientation/ Gender Identity/Religion/National Origin/Disability/Vets, VEVRRA Federal Contractor.